CICEET Progress Report for the period 8/01/00 through 1/31/01

Project Title:

Inflow Loadings from Ground Water to the Great Bay Estuary

Principal Investigator(s):

Larry K. Brannaka,
Thomas P. Ballestero,
Tom Mack (USGS)

I. Accomplishments

A. Scheduled Tasks

During this reporting period, Phases 1 and 2, identification of groundwater discharge zones, and flow quantity and quality characterization, respectively, were to be completed. Phase 3, building a conceptual groundwater model, was scheduled to begin.

The Phase 1 tasks delineating groundwater discharge zones by use of thermal infrared imagery included multiple aerial surveys, deployment and recovery of instrumentation for calibration data, image post-processing (mosaicing), and identification of discharge zones. Aerial surveys were planned to include one in winter and another in summer. Prior to the surveys, digital thermometers and dataloggers were to be deployed in a calibration array throughout the study area to measure actual field conditions. The collected data would function as calibration data to be applied to the thermal mosaiced images to delineate groundwater discharge zones. Image post-processing would mosaic thermal images into a single continuous image for the study area. The thermal images would be scrutinized for suspected groundwater discharge zones, which would then be classified and cataloged.

The Phase 2 quantification of groundwater flux was planned as three concurrent parts: 1) field-verification of suspected groundwater discharge zones, 2) development of a piezometric surface map for the area surrounding the Great Bay Estuary; and 3) aquifer characterization. Field-verification consists of locating areas and characterizing the flow, cross-sectional area, piezometric head, and hydrogeology. Field-verification would be done mostly by boat, around low tide, targeting the tidal zone where the majority of discharge zones were indicated by the thermal images. Creation of a piezometric map consists of measuring water levels in all participating residents’ wells within as short a time period as practical, and using survey data to compute groundwater elevations. The resulting data would be plotted and contoured. Aquifer characterization involves the geophysical analyses of suspected target areas, slug testing of monitoring wells, and analysis of pump test data.

Characterizing groundwater quality in terms of nutrient contamination involves testing samples for nitrogen species, which are the dominant contaminants of interest. Water quality will be investigated by sampling groundwater using mini-piezometers installed in the discharge zones. Salinity will be monitored to verify the discharge is freshwater rather than storage of infiltrated saltwater. Samples will be filtered and preserved for bulk analysis at a later date.

The Phase 3 formulation of a conceptual model involves the construction of a series of maps and overlays to describe various hydrogeological and water quality properties. The maps will form the basis for an overall conceptual groundwater flow model to the Great Bay Estuarine system.

 

B. Progress on Tasks

    Phase 1:

    Progress on Phase 1 has been ongoing, yet is still incomplete. Continued progress on Phase 1 includes the completion of second summer aerial survey, when bay temperatures reached a maximum differential(~69ûF) with respect to groundwater temperature (~48ûF). The aerial survey vendor, Larry Davis Aviation, and the UNH researchers have developed a strong rapport, which has been essential considering the many survey constraints.

    In August, Larry Davis Aviation, along with a UNH researcher flew a second successful survey, despite many weather related difficulties. After many weather delays, the weather forecasts finally fell within the aerial survey constraints and the survey was scheduled. At the time of the actual flight, however, the actual conditions were significantly different from the forecasts, with cloud cover and high winds at 10,000’ elevation (the contracted survey elevation). The survey flight was forced down to 4,000’ to obtain acceptable results. Alterations were necessary in the survey plan to accommodate the change in imaging elevation. As a result, image resolution was improved by 6 times. This improvement was accompanied by an extensive increase in the number of images necessary to obtain a full coverage of the Great Bay Estuarine system. It was decided to forego full coverage of the bay, and to focus the imaging on the tidal zone where the submarine groundwater discharge (SGWD) zones are primarily located. The consequences of this decision were mostly aesthetic, as the final mosaiced image would essentially have a large "hole" in it, but the survey itself was improved through the increased resolution. Survey conditions were acceptable, temperature of groundwater, surface water, and mudflats were approximately 48, 69, and 80 degrees Fahrenheit, respectively. Since this was the second survey, specific SGWD zones identified from the previous (April) survey were monitored to determine their respective thermal signatures.

    .Identification and cataloging of suspected discharge zones from the thermal imagery has been completed for the first survey with over 200 sites identified. The process is underway for the second survey and is nearly 50% complete. The August survey has shown a large increase in the number of zones identified. Two likely explanations for the increase (and at this point they are indistinguishable) have been postulated: 1) the August survey had a dramatically increased image resolution, thereby enabling increased identification; and/or 2) there may also be a seasonal component affecting the increase. Certain discharge zones identified in the August survey are substantially larger than the respective zone shown in the April survey. Generally speaking, there appears to be ubiquitous diffuse low intensity groundwater discharge throughout the bay that is more readily apparent in the August survey.

    The summer of 2000 had unseasonably large amounts of precipitation in comparison with the dry summer of 1999. Snowfall was late and low for the winter of 1999/2000. This winter, following a low precipitation summer would result in low recharge for surface aquifers and could result in a corresponding reduction in groundwater discharge. Long-term monitoring of known discharge zones would clarify this.

    Image post-processing is still ongoing for the April survey with completion expected in the spring. Logistical considerations are being negotiated for the post-processing of the August survey. The USGS was unable to provide the image processing services, and time requirements for image post-processing for the thermal imagery were underestimated. The UNH University researchers have solved the dilemma by working with the Complex Systems Resource Center (CSRC) at UNH to mosaic the thermal images. Fay Rubin of the CSRC has generously accommodated our resource needs and negotiations are underway for continued cooperation to complete the second survey. Completion of the April mosaic is expected in the spring. The August survey mosaic will be completed by the end of the project.

    Phase 2:

    Progress on Phase 2 has been substantial. Field-verification of suspected groundwater discharge zones has been ongoing in the summer and fall with 9 SGWD zones characterized, and 14 sites sampled for water quality. The resulting data has enabled preliminary estimates of flow and nitrate loading resulting from groundwater. Flow and loading estimates indicate that the groundwater contribution is significant.

    Field-efforts are nearly complete for the development of a piezometric surface map. Construction of the first map is underway and completion is expected in the coming months. Data reduction of surveying notes is complete. One final well-monitoring event will occur in the early spring to evaluate the influence of seasonal fluctuations in the water table. Concurrent with the monitoring event, selected wells will be sampled for water quality to characterize upgradient nutrient concentrations.

    The USGS has characterized the aquifer at selected sites in close proximity to identified discharge zones. The initial step of this process involved site selection and reconnaissance for the surface geophysics. UNH investigators provided field assistance in the geophysical surveys. Resistivity data was collected at 7 sites totaling 13 lines. One survey site covering a fracture-correlated lineament was located on the western side of the bay, near a high yielding well. Other sites of interest include Wagon Hill in Durham, and Fox Point in Newfields. Both of these sites are adjacent to large, identified discharge zones. The USGS is currently processing the data, and will be developing plots showing aquifer dimensions and hydrogeologic stratigraphy. Of special interest will be the thickness of the surficial materials.

    UNH investigators performed additional aquifer characterization tests on participating residential wells. Slug tests have been done on selected wells throughout the study area and more testing will be performed during the spring well monitoring event. These data will be used in conjunction with pump test data available from other UNH researchers to determine aquifer parameters, including transmissivity and hydraulic conductivity. The combination of point values obtained from slug testing and pump test data should improve parameter reliability.

    Water quality characterizations are underway. Field-sampling methodologies have been developed using mini-piezometers for extracting groundwater. An UNH lab has been contracted for analysis of nitrate and ammonia analysis. Preliminary analyses indicate significant nitrate contamination exists throughout the bay, with some concentrations exceeding EPA drinking water standards (10 ug/L). Samples are preserved and stored for future bulk analyses. Salinity of groundwater samples has been monitored during sampling to determine extent of groundwater and bay water represented in the respective samples. Saltwater intrusion has been shown to mobilize chemical species within the tidal zone and is therefore necessary to discern by monitoring salinity.

    Phase 3:

    Efforts have begun on constructing maps of groundwater discharge, piezometric contours, and aquifer characteristics. The maps will be prepared and translated into GIS layers. These layers will be an integral part of the conceptual groundwater modeling effort.

C. Difficulties Encountered

The mosaicing of the aerial survey continues to be the most significant difficulty. Initially the USGS were to perform the image post-processing, but due to the lack of the necessary post-processing software this task has been transferred to UNH. The UNH Complex Systems Resource Center (CSRC) has graciously offered resources and facilities by which to post-process. Progress has been slow-going as facilities, labor, and hardware have had to be negotiated. However, recent negotiations with the CSRC have secured the necessary resources to complete the mosaic for the second aerial survey.

Other difficulties included the weather conditions for the time period of the August aerial survey. The survey vendor had to travel from Ohio to NH to perform the survey and therefore required approximately 18 hours advance notice. The forecast for the chosen day proved to be incorrect and two attempts at surveying were aborted due to unfavorable conditions. Since much of the survey expense was in travel time, so rather than send the vendor back only to return at a later date, we chose to fly a daytime survey. Nighttime survey are generally preferred due to lower winds (which was not the case) however, daytime surveys are acceptable if flown near high noon to minimize shadows. The diminishing tidal window and changing environmental conditions impressed the need to survey if at all possible. The conditions at 10,000’ elevation were too windy and cloudy to survey, so the plane dropped to 4,000’ elevation to obtain acceptable survey conditions. The lower elevation survey dramatically increased the cost, the airtime, and necessary imagery to obtain full coverage of the bay . Consequently, we chose to limit the survey to the tidal areas of the Great Bay to stay within budget. The decreased survey elevation resulted in dramatically increased survey resolution which improved our ability to identify groundwater discharge zones. The utility of the survey was not harmed by limiting it to the tidal zones, only the aesthetics were diminished by not having a continuous image.

D. Anticipated Success in Meeting Project Objectives in Scheduled Project Period

None of the delays will affect the completion of scheduled project objectives. The most significant delay, the mosaicing, appears to have been unavoidable given the large time requirements for image post-processing.

E. Preliminary data

The project is in the final data gathering stages and focusing primarily on data reduction and interpretation. At this point, preliminary water quality results and flow estimates have been made and show groundwater is a significant flow component, and a significant contributor of nutrient pollution. It is now believed that groundwater constitutes a significant, if not dominant, source of freshwater to the Great Bay during the summer low-flow months. The flow appears to ubiquitous and uniform throughout the bay, composed of concentrated high volume discharge areas and low volume diffuse discharge areas.

Thermal Infrared Imagery

The mosaicing of thermal imagery is ongoing. Samples of the completed thermal imagery can be downloaded at: ftp://ftp.granit.sr.unh.edu/pub/submissions/Mosaics/. These images are large, some in excess of 70 MB, and are therefore made available by ftp. Substantial portions of the study have been completed. The thermal imagery is being used to delineate groundwater discharge zones throughout the bay. Figure 1 is a portion of a mosaic of the Oyster River in Durham, NH, which shows areas identified as groundwater discharge zones. The thermal signature is evident due to the temperature difference between the groundwater and the surface waters. This survey was performed in April 2000 at 10,000 ft elevation.

Figure 1: Mosaic of Thermal Imagery for Delineating Groundwater Discharge Zones, Oyster River, NH.

 

Seasonality

The thermal imaging surveys were performed during April and August of 2000 to investigate seasonal variations in the discharge zones. Specifically, variations in the size and intensity of the thermal signature of suspected groundwater discharge zones were targeted. Figure 2 illustrates what is hypothesized as seasonal variations in a large discharge zone on Fox Point in Newington, NH. Additional field work will be necessary to verify actual seasonality.

Figure 2: Seasonal Comparison of Groundwater Discharge Zones

Geophysics

Two dimensional direct current resistivity surveys were performed by the USGS along the bank of the Oyster River where it discharges into Great Bay on the south side of Wagon Hill in Durham, NH. Three array configurations, Dipole-Dipole, Schlumberger and Wenner arrays were used on the same survey line to optimize the quality of the interpretations. Each array has strengths and weaknesses in depths of the survey, horizontal and vertical resolution, and signal to noise ratios. The profile was 170 meters in length and imaged the sub-surface electrical properties up to 25 meters in depth.

Preliminary interpretation of the processed data indicates the presence of three distinct hydrogeological units. The units were interpreted from geophysical profiles such as shown in Figure 3. A resistive anomaly of greater than 1000 ohm-m at depth is interpreted as the top of competent bedrock. The conductive material directly on top of the bedrock, ranging from 5 to 300 ohm-m, represents marine clay. This conductive layer slopes from the surface of the profile to depth from southeast to northwest. Several more resistive anomalies were observed within and on top of this clay layer that likely represent permeable sands and or gravels. Estimates of the cross sectional areas of hydraulically conductive materials will be used with other data to characterize groundwater flow at this discharge site.

Figure 3: Geophysical Modeling of Overburden Stratigraphy for Wagon Hill

Water Quality

Preliminary water quality results indicate widespread nitrate contamination in the groundwater discharge throughout the Great Bay Estuary. To date, over 20 sites have been sampled, and 13 sites analyzed, too few to state a trend conclusively. However, the sampled sites distributed throughout the study area are strong early indicators of what will be seen in future data. This data indicates that groundwater discharge is likely a substantial source of nutrient loading. Nitrate had the highest observed values, shown in Table 1, which were in excess of the EPA drinking water standards. No ammonia has been observed, which indicates that any ammonia nitrogen from septic systems is being converted to nitrate through microbially mediated nitrification.

Table 1: Groundwater Discharge Nitrate Concentrations for the Great Bay Estuary

 

Flow/Area, Area, Total Flow Estimates

Discharge estimates are being made from estimates of flow from a known area within the discharge zone, to obtain data in flow per unit area. These measurements are made using seepage meters, which are then verified throughout the discharge zone by measuring the piezometric head at various locations. The total area of the discharge zones was field verified for representative discharge zones and then compared with a method using a GIS query of the thermal imagery. The field verified methods require the laborious and time consuming method of gridding out the discharge zone and then measuring areas as large as 6000 square feet and greater. Once the GIS method is fully developed it will be used to determine the total area for the known discharge zones. So far, measurements of discharge zone areas have yielded zones as large as 12,000 square feet with many averaging around 3,000 square feet. These values have been used to make flow estimates to the bay, which are illustrated in Table 2.


Table 2: Flow Per Discharge Area for Groundwater Discharge Zones

 

These numbers compare very well with other published data for groundwater discharge in coastal environments (Moore 1996, Simmons 1992). Table 3 presents a comparison of measured values from Great Bay to data from Simmons (1992). Previous methods described in the literature identified diffuse discharge locations rather than point sources, as did this research. Diffuse discharge often assumes uniform discharge throughout an area. This research involves diffuse discharge as well as delineated point sources. When the estimates are normalized they are within an order of magnitude.


Table 3: Comparison of Published Groundwater Discharge with Observed Data

Moore estimated that 40% of the river water/freshwater resulted from groundwater discharge (Moore 1996). Comparisons have been made with the Lamprey River, for which historical flow data is available, in Table 4. This is a useful comparison to determine the relative percentage of total freshwater flow that groundwater represents. The Lamprey River is one of 4 major tributaries discharging into the study area (the study area does not include the Bellamy River or areas east of Dover Point). During the low flow summer months (6/1-9/31), when the effects of nutrient pollution are most pronounced, the average groundwater flow exceeds the Lamprey River contribution by nearly 50%.


Table 4: Preliminary Estimates of Total Groundwater Contribution the Great Bay

 

  1. Tasks and activities for next reporting period
    1. Tasks for the next reporting period

    The Phase 1 tasks will be completed during the final reporting period. The August mosaic is expected to take the remainder of the study time to complete. The cataloging of groundwater discharge zones for the second survey is nearing completion. When finished, the sets of suspected groundwater discharge zones from each of the surveys will be compared for consistency and overlap. Groundwater delineation will be ongoing until mid-summer, and final estimates of flow and nutrient loading will be completed.

    The Phase 2 tasks will also be completed. The tasks include the contouring of groundwater surface elevations using the present (completed) data set plus the results of the field verification efforts and well data from Pease International Tradeport. A second groundwater level measurement event is planned for early spring, to verify seasonal variations in the piezometric map. Water surface elevations will be obtained for wells on Pease International Tradeport, which correspond to both measurement events. The USGS will complete interpretation of the geophysics to determine aquifer parameters. Interpretation of slug tests and pump tests will provide aquifer parameters for comparison with the results of the geophysics analyses. Directions and estimates of total groundwater flow will be derived from the potentiometric maps of the Great Bay estuary. These estimates will be compared with estimates obtained from field-verification of groundwater discharge zones.

    Water quality analyses will target discharge zones, and corresponding upgradient wells. Work will continue in the spring, with the selection of up-gradient well locations for groundwater quality analyses. Water quality sampling will be performed on upland areas and SGWD zones with suspected hydrologic links. Comparisons of water quality signatures will be made to ascertain the connectivity between upland areas and the discharge zones.

    Finally, work will begin on the Phase 3 conceptual model, which will integrate the results of all three phases. Composite maps will be assembled, and incorporated into GIS data layers. Maps and results information will be made available on the internet, and will be published in journal articles.

B. Work plan to accomplish tasks

A project meeting with the USGS and UNH was held this winter to coordinate upcoming responsibilities. Responsibilities and tasks were allocated for the various project components.

UNH investigators will proceed on the mosaic for the aerial surveys for Phase 1. A continuous image is necessary to digitize zone areas. UNH researchers will perform the mosaicing using the software Erdas Imagine, provided by the Complex Systems Research Center. The single mosaiced image will be used in conjunction with the thermometer array to assign a temperature to the observed gray scale in the image. The GIS software Arc View will then be used to query for zones within the desired temperature range. This query can be used to select areas, not readily apparent to the observer, which are the result of diffuse groundwater discharge that may be present throughout the study area. These zones, once classified, will be digitized to compute an overall discharge area for the bay. Area estimates for both concentrated and diffuse discharge zones will be used to make calibrated groundwater discharge estimates for the study area.

A final depth-to-water event will be performed in the early spring for the Phase 2 creation of potentiometric surface maps. This event is expected to last one week. Prior to this event, wells will be chosen for water quality sampling, which will be performed concurrently with the measurement event. UNH researchers will use the resulting data to construct a second groundwater piezometric-surface map.

Data reductions of the geophysical analyses are currently being performed by the USGS, with expected completion in the spring. Analysis of slug test and pump test data will be performed by UNH researchers. Additional geophysical characterization (electrical resistivity or seismic refraction) may be used in specific areas of interest where increased resolution of aquifer thickness is needed. This additional work may be supplemented with the installation of small-diameter wells in the overburden.

Water quality sampling will be completed in the spring to early summer. After all of the samples have been collected, they will be submitted for analyses in bulk. Final selection will be made of locations for groundwater quality analysis. Samples will be collected from selected monitoring wells during the spring groundwater measurement event. All samples will be cataloged, preserved and delivered to a local laboratory. The results of water quality analyses from SGWD zone samples along a suspected flow path from a sampled well will compared to the well water analyses results, with regard to signature concentrations. The comparison will evaluate if there is a direct connection, and whether the flow system is local or regional in nature.

 

C. Concerns or difficulties

Concerns regarding apparent variations in the thermal signature of the groundwater discharge zones suggest that further investigation is necessary to determine the cause. It is suspected to be either the result of seasonal variations in total flow or the result of differences in the survey parameters (resolution, environmental conditions). This is not expected to pose a major problem.

Another concern is the variation of intensity or brightness in the thermal images. The imaging instrumentation automatically and continually adjusts the operating temperature range. It ranges approximately 20ºF and adjusts depending on what the dominant feature is. The results were a series of images with varying gray-scale intensities. This poses a problem for uniformly applying a query targeted at specific thermal signal. As there does not yet exist a means for effectively querying a large-scale area and omitting false positives, this is not expected to be a significant problem.

 

III. Expenditures

The expenditures to date are within the range of those planned for this stage of the project.

IV. References:

Moore, Willard. S. (1996), Large Groundwater inputs to coastal waters revealed by 226Ra enrichments, Nature, Vol:380.

Simmons Jr., G.M. (1992) Importance of submarine groundwater discharge and seawater cycling to material flux across sediment/water interfaces in marine environments. Marine ecology progress series. JUL 30 v 84 n 2 173